Community-contributed software supporting SBOL Core and SBOL Visual, enabling you to design, simulate, visualize, and share genetic designs.
A web application for creation and editing of genetic constructs using the SBOL data and visual standard.
A platform of tools to design DNA sequences for manufacturing
A tool for Genetic circuit design automation
Visual biocad canvas for specifying combinatorial DNA constructs for fabrication
DNAplotlib enables highly customizable visualization of individual genetic constructs and libraries of design variants. It can be…
A textual specification language for the rule-based design of synthetic biological systems, devices, parts, and DNA sequences.
Flapjack is a data management and analysis app for genetic circuit characterization to store, share, mix, analyze and plot your…
GeneGenie supports the design and self-assembly of synthetic genes and constructs.
A tool which allows a user to generate genetic logic circuits only by specifying the logical function desired to be achieved in a…
a package of open-source tools initiated by AT&T Labs Research for drawing graphs specified in DOT language scripts.
iBioSim has been developed for the modeling, analysis, and design of genetic circuits.
Physical and Informatic repository and associated tools for plant seeds, microbial strains, DNA and protein sequences.
DNA assembly design automation
Automated derivation of genetic circuit designs from computational models.
A graphical, drag and drop design of synthetic gene circuit with Standard Biological Parts.
A tool for creating SBOL Visual diagrams from a concise textual representation.
Designing Multiplexed Pools for Assembling Library Constructs
Loss-less interconversion of SBOL v1.1 and GenBank
A simple, easy-to-use software tool that allows for conversion between SBOL/GenBank/FASTA files using the Synthetic Biology Open…
A simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using SBOL
An open-access repository of SBOL 2-compliant biochemical parts for a wide range of metabolic engineering applications.
A registry for storing and sharing genetic circuit designs using the SBOL2 standard
A Python environment based on spyder2 IDE, designed for systems and synthetic biology simulations.
A repository of modular models of biological components.
A JavaScript software library to visualize DNA features from SBOL2 documents using the SBOL Visual standard.
Preserved here for reference - these tools supported SBOL at the time of listing.
Serotiny’s web-based protein design software aimed at researchers doing R&D for therapeutics,…
Proto BioCompiler generates optimized genetic regulatory network designs from specifications written…
A widely used open source network design and simulation application tool for synthetic biology