Jason T. Stevens

Publications and posts

Dynamic Modeling of Cellular Populations within iBioSim

As the complexity of synthetic genetic circuits increases, modeling is becoming a necessary first step to inform subsequent experimental efforts. In recent years, the design automation community has developed a wealth of computational tools for assisting experimentalists in designing and analyzing new genetic circuits…

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Dynamic Modeling of Cellular Populations within iBioSim

As the complexity of synthetic genetic circuits increases, modeling is becoming a necessary first step to inform subsequent experimental efforts. In recent years, the design automation community has developed a wealth of computational tools for assisting experimentalists in designing and analyzing new genetic circuits…

DOI

Design and Test of Genetic Circuits Using $ tt iBioSim$iBioSim

The simulation of biological systems prior to their physical implementation can save time, money, and potentially provide insights into alternate designs. This paper presents a simulation environment which allows for a visual design process ultimately leading to a formal model which can be efficiently simulated.

DOI

Design and Test of Genetic Circuits Using $tt iBioSim$iBioSim

The simulation of biological systems prior to their physical implementation can save time, money, and potentially provide insights into alternate designs. This paper presents a simulation environment which allows for a visual design process ultimately leading to a formal model which can be efficiently simulated.

DOI