COMBINE 2015


Date
Jul 25, 2015 4:55 PM

Location: University of Utah in Salt Lake City, USA

Date: October 12-16, 2015
Complete HARMONY Agenda: http://old_co.mbine.org/events/COMBINE_2015

Description:

A conference where the COMBINE community come together to present their work and their incorporations on the COMBINE data standards.

SBOL Agenda:

Monday, October 12th

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  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/recent%20developments%20in%20SBOL%20tools%20and%20repositories.pdf">The Synthetic Biology Open Language (SBOL) &#8211; recent developments in SBOL tools and repositories</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Anil Wipat
</td>
  [03:30PM – 04:15PM MDT]

Tuesday, October 13th

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  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/sbol.pdf">SBOL</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Anil Wipat
</td>
<td style="border-color:#fff">
  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/Multiplicity%20of%20Representation%20in%20SBOL%202.0.pdf">Multiplicity of Representation in SBOL 2.0</a>
</td>

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  Nicholas Roehner
</td>
<td style="border-color:#fff">
  &nbsp; <a href="http://old_co.mbine.org/events/COMBINE_2015/agenda?q=system/files/combine2015-Zhang_libSBOLj2.pdf">libSBOLj 2.0: A Java Library to Support SBOL 2.0</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Zhen Zhang
</td>
<td style="border-color:#fff">
  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/A%20Converter%20from%20the%20Systems%20Biology%20Markup%20Language%20to%20the%20Synthetic%20Biology%20Open%20Language.pdf">A Converter from the Systems Biology Markup Language to the Synthetic Biology Open Language</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Tramy Nguyen
</td>
<td style="border-color:#fff">
  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/SBOL%20visual%20introduction%2C%20recent%20developments%2C%20and%20current%20challenges.pdf">SBOL visual: introduction, recent developments, and current challenges</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Jacob Beal
</td>
<td style="border-color:#fff">
  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/VisBOL.pdf">VisBOL: Web-based tooling for synthetic biology design visualization</a>
</td>

<td style="border-color:#fff;text-align: right;">
  James McLaughlin
</td>
<td style="border-color:#fff">
  &nbsp; SBOL Community Discussion
</td>

<td style="border-color:#fff;text-align: right;">
  Herbert Sauro
</td>
<td style="border-color:#fff">
  &nbsp; SBOL Visual 2.0/SBGN Discussion
</td>

<td style="border-color:#fff;text-align: right;">
  Jake Beal/Augustin Luna
</td>
  [08:30AM – 10:00AM MDT]
  [08:30AM – 08:45AM MDT]
  [08:45AM – 09:00AM MDT]
  [09:00AM – 09:15AM MDT]
  [09:00AM – 09:15AM MDT]
  [11:15AM – 11:30AM MDT]
  [01:30PM – 03:00PM MDT]
  [03:30PM – 05:00PM MDT]

Wednesday, October 14th

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  &nbsp; SBOL Extension Discussion
</td>

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  Raik Gruenberg
</td>
  [03:30PM – 05:00PM MDT]

Thursday, October 15th

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  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/SBOL%20Infrastructure%20Discussion.pdf">SBOL Infrastructure Discussion</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Chris Myers
</td>
  [01:30PM – 03:00PM MDT]

Friday, October 16th

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  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/2015/COMBINE/Ernst_JGI.pdf">On the Adoption of Standards at the DOE Joint Genome Institute</a>
</td>

<td style="border-color:#fff;text-align: right;">
  Ernst Oberortner
</td>
  [10:45AM – 11:00AM MDT]

Poster Session

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  &nbsp; <a href="https://github.com/SynBioDex/Community-Media/blob/master/posters/combine-2015-poster.pdf"> Analysis of Weaknesses in SBOL/SBML Modeling through Creation of Use Cases </a>
</td>

<td style="border-color:#fff;text-align: right;">
  Zach Zundel
</td>
  Monday – Friday Break Sessions