2013 ACS Synthetic Biology Issues
Summary
- Total Articles Analyzed: 80
- Total Figures in All Articles: 408
- Figures Compatible with SBOL Visual: 99 (24.26%)
- Figures Compatible with SBOL Visual & Fully Compliant: 61 (61.62%)
- Figures Compatible with SBOL Visual & Following Best Practices: 36 (36.36%)
Individual issues
February
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Synthesizing Biomolecule-Based Boolean Logic Gates | 3 | 3 | ⭐ |
| Self-Assembly of Synthetic Metabolons through Synthetic Protein Scaffolds: One-Step Purification, Co-immobilization, and Substrate Channeling | 2 | 2 | ⭐ |
March
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Tuning Primary Metabolism for Heterologous Pathway Productivity | 1 | 0 |
May
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Dynamic Modeling of Cellular Populations within iBioSim | 1 | 0 | |
| AutoBioCAD: Full Biodesign Automation of Genetic Circuits | 2 | 2 | ⭐ |
| Reverse Engineering Validation using a Benchmark Synthetic Gene Circuit in Human Cells | 1 | 1 | ⭐ |
| SBROME: A Scalable Optimization and Module Matching Framework for Automated Biosystems Design | 2 | 2 | ⭐ |
June
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Pigeon: A Design Visualizer for Synthetic Biology | 1 | 1 | ⭐ |
July
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Synthetic Biology of Antimicrobial Discovery | 1 | 1 | ⭐ |
August
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Synthetic Gene Circuit-Mediated Monitoring of Endogenous Metabolites: Identification of GAL11 as a Novel Multicopy Enhancer of S-Adenosylmethionine Level in Yeast | 3 | 3 | ⭐ |
| Retroactivity Controls the Temporal Dynamics of Gene Transcription | 1 | 0 | |
| Analysis and Design of a Genetic Circuit for Dynamic Metabolic Engineering | 1 | 0 |
September
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Randomized BioBrick Assembly: A Novel DNA Assembly Method for Randomizing and Optimizing Genetic Circuits and Metabolic Pathways | 5 | 5 | ⭐ |
| Visualization of Evolutionary Stability Dynamics and Competitive Fitness of Escherichia coli Engineered with Randomized Multigene Circuits | 2 | 2 | ⭐ |
October
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Tuning Response Curves for Synthetic Biology | 3 | 0 | |
| Engineering the esaR Promoter for Tunable Quorum Sensing-Dependent Gene Expression | 1 | 0 | |
| Reliable Prediction of Complex Phenotypes from a Modular Design in Free Energy Space: An Extensive Exploration of the lac Operon | 1 | 0 | |
| Expanding the Boolean Logic of the Prokaryotic Transcription Factor XylR by Functionalization of Permissive Sites with a Protease-Target Sequence | 6 | 0 | |
| Genetic Sensor for Strong Methylating Compounds | 2 | 2 | ⭐ |
November
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Discovery of Cryptic Polyketide Metabolites from Dermatophytes Using Heterologous Expression in Aspergillus nidulans | 2 | 2 | ⭐ |
| Sequence, Cloning, and Analysis of the Fluvirucin B1 Polyketide Synthase from Actinomadura vulgaris | 1 | 1 | ⭐ |
| Multiplex Iterative Plasmid Engineering for Combinatorial Optimization of Metabolic Pathways and Diversification of Protein Coding Sequences | 4 | 3 | |
| Refactoring the Silent Spectinabilin Gene Cluster Using a Plug-and-Play Scaffold | 2 | 2 | ⭐ |
| Facile Method for Site-specific Gene Integration in Lysobacter enzymogenes for Yield Improvement of the Anti-MRSA Antibiotics WAP-8294A and the Antifungal Antibiotic HSAF | 2 | 2 | ⭐ |
December
| Article | No. of SBOL Visual compliant images | No. of SBOL Visual images following Best practices | |
|---|---|---|---|
| Artificial Conversion of the Mating-Type of Saccharomyces cerevisiae without Autopolyploidization | 4 | 0 | |
| Cell Polarity-Driven Instability Generates Self-Organized, Fractal Patterning of Cell Layers | 1 | 0 | |
| Yeast Oligo-Mediated Genome Engineering (YOGE) | 1 | 0 |
